• Vcf2gwas-python API for comprehensive GWAS analysis using GEMMA

    14 days ago - By Oxford Journals

    AbstractMotivationGenome-wide association study requires a researcher to perform a multitude of different actions during analysis. From editing and formatting genotype and phenotype information to running the analysis software to summarizing and visualizing the results. A typical GWAS workflow poses a significant challenge of utilizing the command-line, manual text-editing and requiring knowledge of one or more programming/scripting languages, especially for newcomers.Resultsvcf2gwas is a package that provides a convenient pipeline to perform all of the steps of a traditional GWAS workflow...
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