• Best practices on the differential expression analysis of multi-species RNA-seq

    10 days ago - By Genome Biology

    Advances in transcriptome sequencing allow for simultaneous interrogation of differentially expressed genes from multiple species originating from a single RNA sample, termed dual or multi-species transcriptom...
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  • PseudotimeDE: inference of differential gene expression along cell pseudotime with well-calibrated p-values from single-cell RNA sequencing data

    10 days ago - By Genome Biology

    To investigate molecular mechanisms underlying cell state changes, a crucial analysis is to identify differentially expressed genes along the pseudotime inferred from single-cell RNA-sequencing data. Howe...
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