• RAG-Web: RNA structure prediction/design using RNA-As-Graphs

    8 monthes ago - By Oxford Journals

    AbstractSummaryWe launch a webserver for RNA structure prediction and design corresponding to tools developed using our RNA-As-Graphs approach. RAG uses coarse-grained tree graphs to represent RNA secondary structure, allowing the application of graph theory to analyze and advance RNA structure discovery. Our webserver consists of three modules: RAG Sampler: samples tree graph topologies from an RNA secondary structure to predict corresponding tertiary topologies, RAG Builder: builds three-dimensional atomic models from candidate graphs generated by RAG Sampler, and RAG Designer: designs...
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